A comprehensive library of analysis tools for FMRI, MRI and DTI brain imaging data
最近更新: 2年多前The 3D-DNA pipeline was used to error-correct, anchor, order and orient the pieces in the draft assembly. The 3D-DNA visualization module, in conjunction with Juicer Tools, was used to create contact maps for the draft and the final genome assemblies.
最近更新: 2年多前The Subread software package is a tool kit for processing next-gen sequencing data. It includes Subread aligner, Subjunc exon-exon junction detector and featureCounts read summarization program.Subread aligner can be used to align both gDNA-seq and RNA-seq reads. Subjunc aligner was specified designed for the detection of exon-exon junction. For the mapping of RNA-seq reads, Subread performs local alignments and Subjunc performs global alignments.
最近更新: 2年多前Based on evolutionarily-informed expectations of gene content of near-universal single-copy orthologs, BUSCO metric is complementary to technical metrics like N50.
最近更新: 2年多前NEMO: Nucleus for European Modelling of the Ocean is a state-of-the-art modelling framework for research activities and forecasting services in ocean and climate sciences
最近更新: 2年多前Open-source foundation of the user-sponsored PyMOL molecular visualization system.
最近更新: 2年多前NAMD: A parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems.
最近更新: 2年多前The OpenLB project provides a C++ package for the implementation of lattice Boltzmann methods that is general enough to address a vast range of tansport problems, e.g. in computational fluid dynamics. The source code is publicly available and constructed in a well readable, modular way. This enables for a fast implementation of both simple academic test problems and advanced engineering applications.
最近更新: 2年多前A set of tools developed for visualization and processing of long-read sequencing data from Oxford Nanopore Technologies and Pacific Biosciences.
最近更新: 2年多前
